Package: distanceHD 1.4
distanceHD: Distance Metrics for High-Dimensional Clustering
We provide three distance metrics for measuring the separation between two clusters in high-dimensional spaces. The first metric is the centroid distance, which calculates the Euclidean distance between the centers of the two groups. The second is a ridge Mahalanobis distance, which incorporates a ridge correction constant, alpha, to ensure that the covariance matrix is invertible. The third metric is the maximal data piling distance, which computes the orthogonal distance between the affine spaces spanned by each class. These three distances are asymptotically interconnected and are applicable in tasks such as discrimination, clustering, and outlier detection in high-dimensional settings. The package also provides a distance-based outlier detection procedure for high-dimensional, low-sample-size data, as described in Ahn, Lee and Lee (2018).
Authors:
distanceHD_1.4.tar.gz
distanceHD_1.4.zip(r-4.7-any)distanceHD_1.4.zip(r-4.6-any)distanceHD_1.4.zip(r-4.5-any)
distanceHD_1.4.tgz(r-4.6-any)distanceHD_1.4.tgz(r-4.5-any)
distanceHD_1.4.tar.gz(r-4.7-any)distanceHD_1.4.tar.gz(r-4.6-any)
distanceHD_1.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
distanceHD/json (API)
| # Install 'distanceHD' in R: |
| install.packages('distanceHD', repos = c('https://jungaeleeb.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:cc0e4c3276. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 112 | ||
| source / vignettes | OK | 179 | ||
| linux-release | OK | 111 | ||
| macos-release | OK | 164 | ||
| macos-oldrel | OK | 150 | ||
| windows-devel | OK | 58 | ||
| windows-release | OK | 73 | ||
| windows-oldrel | OK | 64 | ||
| wasm-release | OK | 96 |
Exports:dist_cendist_mahdist_mdpHDout
Dependencies:MASS
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Distance Metrics for High-Dimensional Clustering | distanceHD-package distanceHD |
| Centroid distance between two groups | dist_cen dist_centroid |
| ridge Mahalanobis distance between two groups | dist_ma dist_mah |
| Maximal data piling (MDP) distance between two groups | dist_md dist_mdp |
| Outlier detection in high-dimensional data | HDout |
| Gene expression data from Golub et al. (1999) | leukemia |
| Simulated high-dimensional data for outlier detection | simdata |
