Package: distanceHD 1.4

distanceHD: Distance Metrics for High-Dimensional Clustering

We provide three distance metrics for measuring the separation between two clusters in high-dimensional spaces. The first metric is the centroid distance, which calculates the Euclidean distance between the centers of the two groups. The second is a ridge Mahalanobis distance, which incorporates a ridge correction constant, alpha, to ensure that the covariance matrix is invertible. The third metric is the maximal data piling distance, which computes the orthogonal distance between the affine spaces spanned by each class. These three distances are asymptotically interconnected and are applicable in tasks such as discrimination, clustering, and outlier detection in high-dimensional settings. The package also provides a distance-based outlier detection procedure for high-dimensional, low-sample-size data, as described in Ahn, Lee and Lee (2018).

Authors:Jung Ae Lee [aut, cre], Jeongyoun Ahn [aut]

distanceHD_1.4.tar.gz
distanceHD_1.4.zip(r-4.7-any)distanceHD_1.4.zip(r-4.6-any)distanceHD_1.4.zip(r-4.5-any)
distanceHD_1.4.tgz(r-4.6-any)distanceHD_1.4.tgz(r-4.5-any)
distanceHD_1.4.tar.gz(r-4.7-any)distanceHD_1.4.tar.gz(r-4.6-any)
distanceHD_1.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
distanceHD/json (API)

# Install 'distanceHD' in R:
install.packages('distanceHD', repos = c('https://jungaeleeb.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:
  • leukemia - Gene expression data from Golub et al.
  • simdata - Simulated high-dimensional data for outlier detection

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.00 score 251 downloads 4 exports 1 dependencies

Last updated from:cc0e4c3276. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK112
source / vignettesOK179
linux-releaseOK111
macos-releaseOK164
macos-oldrelOK150
windows-develOK58
windows-releaseOK73
windows-oldrelOK64
wasm-releaseOK96

Exports:dist_cendist_mahdist_mdpHDout

Dependencies:MASS